PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00029.1.g01940.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 453aa    MW: 49620.7 Da    PI: 9.828
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00029.1.g01940.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM70.73.7e-221392705128
                           NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknr..at 78 
                                   f+ +P+d el+  yL++ ve+       +i+++d+y  eP +L +     + + +e+ wyf ++ ++k++ gkrk+r  at
  Zjn_sc00029.1.g01940.1.am.mk 139 FHTQPSDLELLRSYLRPWVESGLKAG-AFIHDADVYADEPARLTEtfapaASQDGERAWYFLTPLHRKSEGGKRKSRtvAT 218
                                   5668***************9988555.78**************74467755566888********************7668 PP

                           NAM  79 ksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                    +g W++  k+k+v++   ++++vg ++++ f k++ +   +t W+m e rl
  Zjn_sc00029.1.g01940.1.am.mk 219 GEGWWHNEAKSKPVVDGldGRRHVGYRQSFSFMKKEGSLRIRTGWLMLELRL 270
                                   89*************98888899**********9999999*******99887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100532.362135289IPR003441NAC domain
SuperFamilySSF1019413.66E-29139289IPR003441NAC domain
PfamPF023651.1E-12139270IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MLRVRYGGCA DGEIERFICL KLPASTTVSP IHSPIGPGYT RTSAALPLDK RPAAFPQKPE  60
RKTNLARPLG ASPFNSNRPS PAAQESVARR NPTRFLRLFG YARPPPPLGR PLSVSVYMVR  120
SPTTPPPTPN GKPAPNAPFH TQPSDLELLR SYLRPWVESG LKAGAFIHDA DVYADEPARL  180
TETFAPAASQ DGERAWYFLT PLHRKSEGGK RKSRTVATGE GWWHNEAKSK PVVDGLDGRR  240
HVGYRQSFSF MKKEGSLRIR TGWLMLELRL GDAEDPREGG LVLCKVYRSP RHPGTITCPA  300
ARDQLPRPER KTNDDERSDA AAGRRKFDGE GSSAATPRIT YEAIPDTAAA AARGRKEKAA  360
DDNDDSDETW LNSPDSKRKA ANDETSVAAS AAEHAQSKRK TEGGLHYCPQ CGFHLDAVMA  420
AVNAKSSETK SEVGIVQVQG DSLVKDHSFH QFI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004969524.12e-80PREDICTED: protein ATAF2-like
TrEMBLK3XIX72e-80K3XIX7_SETIT; Uncharacterized protein
STRINGSi001850m7e-80(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40112972
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.23e-18NAC domain containing protein 47